Genes interaction with Plants
| Gene | Locus | Function |
| aag | RBAM_03581 | DNA repair/ recombination |
| abh | RBAM_014220 | transition state regulator of transcription |
| abnA | RBAM_025870 | arabinan degradation |
| abrB | RBAM_000460 | regulation of gene expression during the transition from growth to stationary phase |
| acnA | RBAM_029230 | amylocyclicin synthesis |
| acnB | RBAM_029240 | amylocyclicin synthesis |
| acnC | RBAM_029220 | amylocyclicin synthesis |
| acnD | RBAM_029210 | amylocyclicin export |
| acnE | RBAM_029200 | amylocyclicin export |
| acnF | RBAM_029190 | amylocyclicin immunity |
| acoL | RBAM_008330 | acetoin utilization |
| acpK | RBAM_016940 | polyketide biosynthesis |
| alaR | RBAM_028510 | transcriptional regulator (Lrp family) of the alaR-alaT operon |
| alaS | RBAM_024510 | translation |
| ald | RBAM_028980 | alanine utilization |
| alsD | RBAM_033160 | overflow metabolism |
| alsS | RBAM_033170 | overflow metabolism |
| amyC | RBAM_027210 | probably melibiose uptake |
| ansA | RBAM_021710 | asparagine degradation |
| appA | RBAM_011380 | uptake of oligopeptides |
| appF | RBAM_011370 | uptake of oligopeptides |
| araA | RBAM_025860 | arabinose utilization |
| araB | RBAM_025850 | arabinose utilization |
| araD | RBAM_025840 | arabinose utilization |
| araL | RBAM_025830 | detoxification of accidental accumulation of phosphorylated metabolites |
| araM | RBAM_025820 | biosynthesis of phosphoglycerolipids |
| araN | RBAM_025810 | uptake of alpha-1,5-arabinooligosaccharides |
| araP | RBAM_025800 | uptake of alpha-1,5-arabinooligosaccharides |
| araQ | RBAM_025790 | uptake of alpha-1,5-arabinooligosaccharides |
| argC | RBAM_011190 | biosynthesis of arginine |
| argF | RBAM_011250 | biosynthesis of arginine |
| argG | RBAM_026380 | biosynthesis of arginine |
| asd | RBAM_016590 | biosynthesis of threonine, lysine, dipicolic acid, peptidoglycan |
| atpC | RBAM_033960 | ATP synthesis |
| atpF | RBAM_034010 | ATP synthesis |
| atpH | RBAM_034000 | ATP synthesis |
| bacA | RBAM_034930 | biosynthesis of the antibiotic bacilysin |
| bacB | RBAM_034920 | biosynthesis of the antibiotic bacilysin |
| bacC | RBAM_034910 | biosynthesis of the antibiotic bacilysin |
| bacD | RBAM_034900 | biosynthesis of the antibiotic bacilysin |
| bacE | RBAM_034890 | self-protection against bacilysin |
| bacF | RBAM_034880 | biosynthesis of the antibiotic bacilysin |
| bacG | RBAM_034870 | biosynthesis of the antibiotic bacilysin |
| baeB | RBAM_016900 | nonribosomal synthesis of the polyketide bacillaene |
| baeC | RBAM_016910 | nonribosomal synthesis of the polyketide bacillaene |
| baeD | RBAM_016920 | nonribosomal synthesis of the polyketide bacillaene |
| baeE | RBAM_016930 | nonribosomal synthesis of the polyketide bacillaene |
| baeG | RBAM_016950 | nonribosomal synthesis of the polyketide bacillaene |
| baeH | RBAM_016960 | nonribosomal synthesis of the polyketide bacillaene |
| baeI | RBAM_016970 | nonribosomal synthesis of the polyketide bacillaene |
| baeJ | RBAM_016980 | nonribosomal synthesis of the polyketide bacillaene |
| baeL | RBAM_016990 | nonribosomal synthesis of the polyketide bacillaene |
| baeM | RBAM_017000 | nonribosomal synthesis of the polyketide bacillaene |
| baeN | RBAM_017010 | nonribosomal synthesis of the polyketide bacillaene |
| baeR | RBAM_017020 | nonribosomal synthesis of the polyketide bacillaene |
| baeS | RBAM_017030 | cytochrome P450 of bacillaene metabolism |
| bcd | RBAM_022360 | utilization of branched-chain keto acids |
| bdhA | RBAM_006650 | overflow metabolism, fermentation |
| besA | RBAM_029060 | iron acquisition |
| bglC | RBAM_018100 | beta-1,4-glucan degradation |
| bglH | RBAM_036350 | salicin utilization |
| bglS | RBAM_036190 | lichenan degradation |
| bkdAA | RBAM_022330 | utilization of branched-chain keto acids |
| bkdB | RBAM_022310 | utilization of branched-chain keto acids |
| bmyA | RBAM_018180 | Nonribosomal bacillomycin synthesis |
| bmyB | RBAM_018170 | Nonribosomal bacillomycin synthesis |
| bmyC | RBAM_018160 | Nonribosomal bacillomycin synthesis |
| bmyD | RBAM_018190 | Nonribosomal bacillomycin synthesis |
| bpr | RBAM_015130 | protein degradation |
| bsdB | RBAM_003800 | IAA synthesis |
| bsdC | RBAM_003810 | IPyA pathway of IAA biosynthesis |
| cdaR | RBAM_002290 | regulation of c-di-AMP synthesis |
| cdd | RBAM_023600 | pyrimidine interconversion |
| cgeD | RBAM_019600 | maturation of the outermost layer of the spore |
| chbA | RBAM_017540 | chitin binding |
| cheC | RBAM_016290 | motility and chemotaxis |
| cheD | RBAM_016300 | motility and chemotaxis |
| cheV | RBAM_013800 | control of CheA activity |
| cimH | RBAM_036020 | citrate uptake |
| citB | RBAM_017800 | TCA cycle |
| citM | RBAM_007810 | uptake of citrate and magnesium |
| citZ | RBAM_026180 | TCA cycle |
| colA | RBAM_007740 | biofilm formation, adhesion on plant surfaces |
| colB | RBAM_007750 | biofilm formation, adhesion on plant surfaces |
| colC | RBAM_007760 | biofilm formation, adhesion on plant surfaces |
| colD | RBAM_007770 | biofilm formation, adhesion on plant surfaces |
| comA | RBAM_028760 | biocontrol plant pathogens |
| comS | RBAM_003670 | genetic competence; competence protein S |
| comX | RBAM_028780 | quorum sensing |
| cotG | RBAM_033230 | resistance of the spore |
| cpgA | RBAM_015610 | ribosome assembly, coordination of peptidoglycan deposition in the cell wall |
| csfB | RBAM_000330 | control of SigG and SigE activity |
| csn | RBAM_029740 | chitin degradation |
| cspB | RBAM_009370 | RNA chaperone, involved in elicitation of plant basal defence |
| cspC | RBAM_005400 | RNA chaperone, involved in elicitation of plant basal defence |
| cspD | RBAM_020070 | RNA chaperone, involved in elicitation of plant basal defence |
| ctaG | RBAM_014790 | formation of functional cytochrome C-oxidase (caa3) |
| cysC | RBAM_015430 | sulfate reduction and activation |
| cysJ | RBAM_030600 | sulfite reduction |
| cysP | RBAM_015410 | sulfate uptake |
| dacA | RBAM_000130 | carboxypeptidase |
| degQ | RBAM_028800 | regulation of exoenzyme synthesis |
| degR | RBAM_020080 | activation of degradative enzymes (aprE, nprE, sacB) production or activity |
| degU | RBAM_032640 | regulation of degradative enzymes, genetic competence, and other adaptive responses |
| degV | RBAM_032630 | fatty acid binding |
| dfnA | RBAM_022080 | Nonribosomal synthesis of difficidin |
| dfnB | RBAM_022050 | Nonribosomal synthesis of difficidin |
| dfnC | RBAM_022040 | Nonribosomal synthesis of difficidin |
| dfnD | RBAM_022030 | Nonribosomal synthesis of difficidin |
| dfnE | RBAM_022020 | Nonribosomal synthesis of difficidin |
| dfnF | RBAM_022010 | Nonribosomal synthesis of difficidin |
| dfnG | RBAM_022000 | Nonribosomal synthesis of difficidin |
| dfnH | RBAM_021990 | Nonribosomal synthesis of difficidin |
| dfnI | RBAM_021980 | Nonribosomal synthesis of difficidin |
| dfnJ | RBAM_021970 | Nonribosomal synthesis of difficidin |
| dfnK | RBAM_021960 | Nonribosomal synthesis of difficidin |
| dfnL | RBAM_021950 | Nonribosomal synthesis of difficidin |
| dfnM | RBAM_021940 | Nonribosomal synthesis of difficidin |
| dfnX | RBAM_022060 | Nonribosomal synthesis of difficidin |
| dfnY | RBAM_022070 | Nonribosomal synthesis of difficidin |
| dhaS | RBAM_019060 | involved in IAA synthesis |
| dhbA | RBAM_029050 | biosynthesis of the siderophore bacillibactin |
| dhbB | RBAM_029020 | biosynthesis of the siderophore bacillibactin |
| dhbC | RBAM_029040 | biosynthesis of the siderophore bacillibactin |
| dhbE | RBAM_029030 | biosynthesis of the siderophore bacillibactin |
| dhbF | RBAM_029010 | biosynthesis of the siderophore bacillibactin |
| divIC | RBAM_000710 | cell-division initiation protein (septum formation), component of septosome (with DivIB) |
| dnaK | RBAM_023770 | protein quality control |
| ebrB | RBAM_017100 | multidrug resistance |
| eno | RBAM_031260 | enzyme in glycolysis/ gluconeogenesis |
| epr | RBAM_035660 | protein degradation |
| epsA | RBAM_031670 | biofilm formation, Exopolysaccharide |
| epsB | RBAM_031660 | biofilm formation |
| epsC | RBAM_031650 | Biofilm formation |
| epsD | RBAM_031640 | Biofilm formation |
| epsE | RBAM_031630 | biofilm formation |
| era | RBAM_023590 | ribosome assembly |
| fabI | RBAM_011730 | fatty acid biosynthesis |
| fadA | RBAM_029910 | fatty acid degradation |
| fadN | RBAM_029920 | fatty acid degradation |
| fapR | RBAM_015710 | regulation of fatty acid biosynthesis |
| fbaA | RBAM_034280 | enzyme in glycolysis/ gluconeogenesis |
| fenA | RBAM_018460 | nonribosomal synthesis of fengycin |
| fenB | RBAM_018450 | nonribosomal synthesis of fengycin |
| fenC | RBAM_018440 | nonribosomal synthesis of fengycin |
| fenD | RBAM_018430 | nonribosomal synthesis of fengycin |
| fenE | RBAM_018420 | nonribosomal synthesis of fengycin |
| feuA | RBAM_002120 | acquisition of iron |
| flgK | RBAM_032560 | motility and chemotaxis |
| flgL | RBAM_032550 | motility and chemotaxis |
| flgM | RBAM_032580 | control of SigD activity |
| fliD | RBAM_032500 | motility and chemotaxis |
| fliJ | RBAM_016080 | movement and chemotaxis |
| fliK | RBAM_016100 | movement and chemotaxis |
| fliL | RBAM_016140 | movement and chemotaxis |
| fliM | RBAM_016150 | movement and chemotaxis |
| fliP | RBAM_016190 | export of flagellum components |
| fliS | RBAM_032490 | Motility and chemotaxis |
| folC | RBAM_025130 | biosynthesis of folate |
| fosB | RBAM_011160 | confers resistence against antimicrobial compounds from B. amyloliquefaciens FZB42 |
| fpbQ | RBAM_004080 | acquisition of iron |
| frlB | RBAM_029670 | metabolism of aminoacylated fructose |
| frlD | RBAM_029630 | metabolism of sugar amines |
| fruC | RBAM_006560 | utilization of sucrose and glucitol |
| fruR | RBAM_014120 | regulation of fructose utilization |
| ftsH | RBAM_000800 | cell division, sporulation initiation |
| ftsL | RBAM_015010 | septum formation |
| ftsZ | RBAM_015120 | formation of Z-ring |
| fusA | RBAM_001370 | translation |
| gabP | RBAM_006710 | utilization of gamma-amino butyric acid |
| galE | RBAM_036080 | galactose utilization |
| galE1 | RBAM_012140 | galactose utilization |
| galK | RBAM_035460 | galactose utilization |
| galK1 | RBAM_012150 | galactose utilization |
| galT1 | RBAM_012130 | galactose utilization |
| gapB | RBAM_026060 | anabolic enzyme in gluconeogenesis |
| gcvPB | RBAM_022870 | glycine utilization |
| gcvT | RBAM_022890 | glycine utilization |
| ggt | RBAM_018540 | degradation of poly-glutamate capsules |
| glmS | RBAM_002320 | cell wall synthesis |
| glnR | RBAM_017250 | regulation of glutamine synthesis |
| glpF | RBAM_009540 | glycerol uptake |
| glpK | RBAM_009550 | glycerol utilization |
| glpP | RBAM_009530 | regulation of glycerol and glycerol-3-phosphate utilization |
| glpQ | RBAM_002600 | glycerol-3-phosphate utilization, degradation of wall teichoic acid during phosphate starvation |
| gltT | RBAM_010420 | glutamate and aspartate uptake |
| glvR | RBAM_008370 | regulation of maltose utilization |
| gmuG | RBAM_035930 | glucomannan utilization |
| grpE | RBAM_023780 | control of DnaK activity |
| gudB | RBAM_021110 | glutamate utilization, control of GltC activity |
| gutA | RBAM_006550 | glucitol uptake |
| hag | RBAM_032510 | motility and chemotaxis |
| hbuT | RBAM_018230 | 3-hydroxybutyrate utilization |
| hepT | RBAM_020900 | menaquinone biosynthesis |
| hpf | RBAM_032460 | ribosome hibernation promoting factor |
| hrcA | RBAM_023790 | regulation of chaperone gene expression |
| htpX | RBAM_013260 | quality control of membrane proteins |
| hutH | RBAM_036410 | histidine utilization |
| ileS | RBAM_015260 | translation |
| ilvC | RBAM_025350 | biosynthesis of branched-chain amino acids |
| infA | RBAM_001640 | translation |
| infB | RBAM_016470 | translation |
| infC | RBAM_025930 | translation |
| iolA | RBAM_036780 | myo-inositol catabolism |
| iolB | RBAM_036770 | myo-inositol catabolism |
| iolC | RBAM_036760 | myo-inositol catabolism |
| iolD | RBAM_036750 | myo-inositol catabolism |
| iolE | RBAM_036740 | myo-inositol catabolism |
| iolF | RBAM_036730 | D-chiro-inositol uptake |
| iolG | RBAM_036720 | myo-inositol catabolism |
| iolH | RBAM_036710 | utilization of inositol |
| iolI | RBAM_036700 | myo-inositol catabolism |
| iolS | RBAM_036800 | unknown, may be involved in myo-inositol catabolism |
| iolT | RBAM_006270 | myo-inositol uptake |
| iseA | RBAM_018500 | protection against cell envelope stress |
| kbl | RBAM_016840 | threonine utilization |
| kinD | RBAM_013420 | initiation of sporulation |
| kre | RBAM_013810 | control of ComK accumulation and of bistable competence gene expression |
| ktrC | RBAM_014230? | potassium uptake |
| lacE | RBAM_012160 | sugar uptake and phosphorylation |
| lacF | RBAM_012170 | sugar uptake and phosphorylation |
| lacG | RBAM_012180 | metabolism of lactose |
| lacR | RBAM_012190 | control lactose uptake |
| lepA | RBAM_023810 | translation |
| leuA | RBAM_025340 | biosynthesis of leucine |
| leuB | RBAM_025330 | biosynthesis of leucine |
| leuD | RBAM_025310 | biosynthesis/ acquisition of amino acids |
| liaH | RBAM_030250 | resistance against oxidative stress and cell wall antibiotics |
| liaI | RBAM_030260 | resistance against oxidative stress and cell wall antibiotics |
| licA | RBAM_035770 | lichenan uptake and phosphorylation |
| licB | RBAM_035790 | lichenan uptake and phosphorylation |
| licH | RBAM_035760 | lichenan utilization |
| lipC | RBAM_004340 | utilization of lipids |
| loaP | RBAM_022090 | Antitermination of polyketide synthesis |
| ltaS | RBAM_007920? | biosynthesis of lipoteichoic acid |
| luxS | RBAM_027680 | methionine salvage |
| lytA | RBAM_032790 | autolysis |
| lytD | RBAM_032900 | autolysis |
| maeA | RBAM_034210 | malate utilization |
| malA | RBAM_008360 | maltose utilization |
| malP | RBAM_008380 | maltose uptake and phosphorylation |
| map | RBAM_001630 | removal of N-terminal methionine from nascent proteins |
| mdh | RBAM_026160 | TCA cycle |
| mdtR | RBAM_029970 | regulation of the multidrug-resistance mdtR-mdtP operon |
| med | RBAM_011300 | regulation of competence |
| mifM | RBAM_022190 | control of yidC2 translation |
| minC | RBAM_025050 | septum placement |
| mlnA | RBAM_014330 | nonribosomal synthesis of macrolactin |
| mlnB | RBAM_014340 | nonribosomal synthesis of macrolactin |
| mlnC | RBAM_014350 | nonribosomal synthesis of macrolactin |
| mlnD | RBAM_014360 | nonribosomal synthesis of macrolactin |
| mlnE | RBAM_014370 | nonribosomal synthesis of macrolactin |
| mlnF | RBAM_014380 | nonribosomal synthesis of macrolactin |
| mlnG | RBAM_014390 | nonribosomal synthesis of macrolactin |
| mlnH | RBAM_014400 | nonribosomal synthesis of macrolactin |
| mmgD | RBAM_022420 | mother cell metabolism |
| mraZ | RBAM_014990 | putative protein involved in cell division or replication |
| mrsK2 | RBAM_036640 | control of mersacidin detoxification |
| mscL | RBAM_033560 | resistance to osmotic downshock glycine betaine export |
| mtlA | RBAM_004230 | mannitol uptake and phosphorylation, control of MtlR activity |
| mtlD | RBAM_004250 | mannitol utilization |
| murB | RBAM_015090 | peptidoglycan precursor biosynthesis |
| ndh | RBAM_036970 | respiration |
| ndoA | RBAM_005000 | RNase EndoA, MazF family toxin, UACAU-specific mRNA interferase |
| ndoAI | RBAM_004990 | antitoxin, antagonist for EndoA |
| nfrA | RBAM_035360 | detoxification of oxygen radicals |
| nin | RBAM_003600 | genetic transformation, DNA uptake |
| nupN | RBAM_028640 | uptake of guanosine |
| odhB | RBAM_019120 | TCA cycle |
| oppA | RBAM_011430 | initiation of sporulation, competence development |
| oppB | RBAM_011440 | initiation of sporulation, competence development |
| oppD | RBAM_011460 | initiation of sporulation, competence development |
| oppF | RBAM_011470 | initiation of sporulation, competence development |
| opuD | RBAM_027160 | compatible solute transport |
| pabA | RBAM_000860 | biosynthesis of folate and tryptophan |
| pabB | RBAM_000850 | biosynthesis of folate and tryptophan |
| pabC | RBAM_000870 | biosynthesis of folate |
| patB | RBAM_028540 | IPyA pathway of IAA biosynthesis |
| pbpE | RBAM_006140 | endopeptidase |
| pbpF | RBAM_010340 | bifunctional glucosyltransferase/ transpeptidase |
| pdhB | RBAM_014430 | links glycolysis and TCA cycle |
| pdhC | RBAM_014440 | links glycolysis and TCA cycle |
| penP | RBAM_012080 | b-Lactamase precursor |
| perR | RBAM_008820 | regulation of the response to peroxide |
| pgcA | RBAM_009570 | interconversion of glucose 6-phosphate and alpha-glucose 1-phosphate |
| pgi | RBAM_028430 | enzyme in glycolysis / gluconeogenesis |
| pgk | RBAM_031290 | enzyme in glycolysis/ gluconeogenesis |
| pgm | RBAM_012200 | enzyme in glycolysis / gluconeogenesis |
| pgm2 | RBAM_031270 | enzyme in glycolysis / gluconeogenesis |
| pgprA | RBAM_017410 | essential for plant growth promotion |
| pheS | RBAM_025710 | translation |
| phoP | RBAM_026150 | regulation of phosphate metabolism |
| phrC | RBAM_004020 | control of ComA activity |
| phyC | RBAM_019640 | utilization of inositol hexakisphosphate (phytate) |
| ponA | RBAM_020470 | bifunctional glucosyltransferase/ transpeptidase |
| priA | RBAM_015540 | DNA replication initiation |
| proA | RBAM_012940 | biosynthesis of proline |
| proB | RBAM_012930 | biosynthesis of proline |
| prpC | RBAM_015590 | antagonist of PrkC-dependent phosphorylation |
| pstS | RBAM_023290 | high-affinity phosphate uptake |
| pta | RBAM_034850 | overflow metabolism |
| ptb | RBAM_022370 | utilization of branched-chain keto acids |
| ptsH | RBAM_013670 | PTS-dependent sugar transport and carbon catabolite repression |
| ptsI | RBAM_013680 | PTS-dependent sugar transport |
| purD | RBAM_006950 | purine biosynthesis |
| purF | RBAM_006910 | purine biosynthesis |
| purH | RBAM_006940 | purine biosynthesis |
| purK | RBAM_006850 | purine biosynthesis |
| purM | RBAM_006920 | purine biosynthesis |
| purN | RBAM_006930 | purine biosynthesis |
| putC | RBAM_003450 | proline utilization |
| pyrF | RBAM_015380 | pyrimidine biosynthesis |
| pyrH | RBAM_016350 | pyrimidine biosynthesis |
| pznA | RBAM_007441 | plantazolicin synthesis and transport |
| pznB | RBAM_007480 | plantazolicin synthesis and transport |
| pznC | RBAM_007460 | plantazolicin synthesis and transport |
| pznD | RBAM_007470 | plantazolicin synthesis and transport |
| pznE | RBAM_007490 | plantazolicin synthesis and transport |
| pznF | RBAM_007400 | plantazolicin synthesis and transport |
| pznG | RBAM_007420 | plantazolicin ABC transport |
| pznH | RBAM_007430 | plantazolicin ABC transport |
| pznI | RBAM_007440 | plantazolicin synthesis and transport |
| pznJ | RBAM_007450 | plantazolicin synthesis and transport |
| pznK | RBAM_007410 | plantazolicin synthesis and transport |
| pznL | RBAM_007500 | plantazolicin synthesis and transport |
| qoxA | RBAM_035430 | respiration |
| qoxB | RBAM_035420 | respiration |
| racA | RBAM_034190 | putative transporter |
| racX | RBAM_005490 | production of non-canonical D-amino acids |
| rapA | RBAM_012450 | control of sporulation initiation |
| rapF | RBAM_034530 | control of ComA activity |
| RBAM_005200 | RBAM_005200 | unknown |
| RBAM_029720 | RBAM_029720 | menaquinone biosynthesis |
| RBAM_035610 | RBAM_035610 | unknown |
| recA | RBAM_016780 | DNA repair/ recombination |
| resA | RBAM_021290 | cytochrome c biogenesis |
| resE | RBAM_021250 | regulation of aerobic and anaerobic respiration |
| rghR | RBAM_030940 | transcriptional repressor |
| ricA | RBAM_016860 | antagonist of biofilm repression by SinR, control of the phosphorelay |
| rnjA | RBAM_014270? | RNA processing |
| rny | RBAM_016800 | RNA processing and degradation |
| rnz | RBAM_022150 | processing of CCA-less tRNA precursors |
| rocA | RBAM_034980 | arginine, ornithine and citrulline utilization |
| rocD | RBAM_037250 | arginine, ornithine and citrulline utilization |
| rocE | RBAM_037240 | arginine, ornithine and citrulline uptake |
| rocF | RBAM_037230 | arginine, ornithine and citrulline utilization |
| rodZ | RBAM_016750 | required for cell shape determination |
| rpe | RBAM_015620 | pentose phosphate pathway |
| rplA | RBAM_001280 | translation |
| rplD | RBAM_001420 | translation |
| rplJ | RBAM_001290 | translation |
| rplM | RBAM_001740 | translation |
| rplU | RBAM_025010 | translation |
| rpmA | RBAM_024990 | translation |
| rpmGA | RBAM_023220 | translation |
| rpoA | RBAM_001680 | transcription |
| rpoC | RBAM_001330 | transcription |
| rpsI | RBAM_001750 | translation |
| rpsK | RBAM_001670 | translation |
| rpsM | RBAM_001660 | translation |
| rpsO | RBAM_016520 | translation |
| rpsR | RBAM_037980 | translation |
| rpsU | RBAM_023710 | translation |
| rsbX | RBAM_005080 | control of SigB activity |
| rsiW | RBAM_002270 | control of SigW activity |
| sacB | RBAM_037650 | utilization of sucrose, production of levan |
| scoB | RBAM_018210 | 3-hydroxybutyrate utilization |
| scoC | ?RBAM_010230 | transition state regulator |
| sda | RBAM_023990 | check point factor coupling initiation of sporulation and replication initiation |
| sdhB | RBAM_025500 | TCA cycle |
| secE | RBAM_001250 | protein secretion |
| secY | RBAM_001610 | protein secretion |
| sfp | RBAM_003740 | 4-phosphopantetheinyl transferase (Surfactin synthetase-activating enzyme) |
| sigA | RBAM_023510 | transcription |
| sigD | RBAM_016310 | transcription |
| sigH | RBAM_001230 | transcription |
| sigW | RBAM_002260 | transcription of early stationary phase genes (sporulation, competence) |
| sinI | RBAM_022920 | antagonist of SinR, drives SlrR from the SlrR(LOW) to the SlrR(HIGH) state |
| sirA | RBAM_017700 | control of chromosome copy number |
| sodA | RBAM_023340 | control of motility and biofilm formation |
| speA | RBAM_014490 | spermidine, polyamine biosynthesis |
| speB | RBAM_034610 | spermidine, polyamine biosynthesis |
| spmA | RBAM_021320 | spore maturation |
| spo0A | RBAM_022550 | phosphorelay regulator, initiation of sporulation, coordinates DNA replication and initiation of sporulation by binding to sites close to the oriC |
| spoIIB | RBAM_025110 | spatial and temporal regulator of the dissolution of septal peptidoglycan during engulfment (stage II sporulation) |
| spoIIID | RBAM_033620 | transcriptional regulator |
| spx | RBAM_011500 | regulation of mother cell gene expression |
| srfAA | RBAM_003650 | nonribosomal synthesis of surfactin |
| srfAB | RBAM_003660 | nonribosomal synthesis of surfactin |
| srfAC | RBAM_003680 | nonribosomal synthesis of surfactin |
| srfAD | RBAM_003690 | nonribosomal synthesis of surfactin |
| ssbB | RBAM_033530 | DNA replication, DNA repair/ recombination |
| sspI | RBAM_025730 | DNA replication, DNA repair/ recombination |
| sucC | RBAM_015920 | TCA cycle |
| sucD | RBAM_015930 | TCA cycle |
| sufU | RBAM_029760 | iron-sulfur cluster assembly scaffold protein |
| swrA | RBAM_032370 | essential for swarming differentiation on solid surfaces, control of DegU activity |
| swrB | RBAM_016320? | control of SigD activity |
| swrC | RBAM_007110 | Resistance against toxins/ antibiotics |
| tagO | RBAM_032680 | biosynthesis of teichoic acid |
| tagV | RBAM_032670 | transfer of anionic cell wall polymers from lipid-linked precursors to peptidoglycan |
| tasA | RBAM_022940 | transfer of anionic cell wall polymers from lipid-linked precursors to peptidoglycan |
| tatAD | RBAM_002940 | biofilm formation |
| tatAy | RBAM_006430 | TAT protein secretion |
| tatCy | RBAM_006440 | TAT protein secretion |
| tcyK | RBAM_030830 | cystine uptake |
| tdh | RBAM_016830 | threonine utilization |
| thiV | RBAM_013090 | thiamine uptake |
| thrB | RBAM_029350 | biosynthesis of threonine |
| tilS | RBAM_000780 | tRNA modification, control of ftsH expression |
| tlp | RBAM_017840 | thioredoxin-like protein |
| tpx | RBAM_026420 | resistance against oxidative stress |
| trmU | RBAM_024610 | tRNA modification |
| trpA | RBAM_020800 | biosynthesis of tryptophan |
| trpB | RBAM_020810 | biosynthesis of tryptophan |
| trpC | RBAM_020830 | biosynthesis of tryptophan |
| trpD | RBAM_020840 | biosynthesis of tryptophan |
| trpE | RBAM_020850 | biosynthesis of tryptophan |
| tuaA | RBAM_032760 | biosynthesis of teichuronic acid |
| tuaB | RBAM_032750 | biosynthesis of teichuronic acid |
| tuaC | RBAM_032740 | biosynthesis of teichuronic acid |
| tuaD | RBAM_032730 | biosynthesis of teichuronic acid |
| tuaE | RBAM_032720 | biosynthesis of teichuronic acid |
| tuaF | RBAM_032710 | biosynthesis of teichuronic acid |
| tuaG | RBAM_032700 | biosynthesis of teichuronic acid |
| tuaH | RBAM_032690 | biosynthesis of teichuronic acid |
| tufA | RBAM_001380 | translation |
| valS | RBAM_025140 | translation |
| veg | RBAM_000530 | control of biofilm formation |
| vpr | RBAM_035320 | protein degradation |
| xhlA | RBAM_012640 | involved in cell lysis upon induction of PBSX |
| xynA | RBAM_033790 | xylan degradation |
| xynC | RBAM_018140 | xylan degradation |
| xynD | RBAM_018150 | xylan degradation |
| yaaA | RBAM_000030 | assembly of the 50S subunit of the ribosome |
| yaaO | RBAM_000360 | arabinoxylan degradation |
| yaaR | RBAM_000390 | arabinoxylan degradation |
| yaaT | RBAM_000410 | control of the phosphorelay, required for the achieving a sufficient level of Spo0A-P for sporulation initiation |
| yabP | RBAM_000690 | required for sporulation at a late stage |
| yabR | RBAM_000720 | unknown |
| ybfQ | RBAM_002740 | unknown |
| ybgB | RBAM_029690 | unknown |
| ybxF | RBAM_001340 | highly expressed protein, similar to ribosomal protein L7AE family, associated with the ribosome during exponential growth, binds K-turns in RNA switches |
| yceD | RBAM_003160 | required for survival of ethanol stress |
| yceE | RBAM_003170 | required for survival of ethanol stress and at low temperatures |
| yceF | RBAM_003180 | general stress protein, similar to tellurium resistance protein |
| yceH | RBAM_003200 | similar to toxic anion resistance protein |
| ycgB | RBAM_003270 | unknown |
| yclJ | RBAM_003990 | Two-component response regulator YclK |
| yclK | RBAM_004000 | Two-component sensor histidine kinase |
| ycsD | RBAM_004260 | fatty acid biosynthesis |
| ycsN | RBAM_004380 | aryl-alcohol dehydrogenase |
| yczE | RBAM_003750 | regulation of antibiotic synthesis |
| yczI | RBAM_004350 | unknown |
| ydbM | RBAM_004850 | sulphur metabolism |
| ydgH1 | RBAM_016690 | Putative drug exporter of the RND superfamily |
| ydhB | RBAM_006030 | unknown |
| ydjI | RBAM_006610 | putative membrane spanning protein YdhB |
| yebC | RBAM_006800 | unknown |
| yfhE | RBAM_008570 | survival of stress conditions and low temperatures |
| yfhH | RBAM_008600 | unknown |
| yfhL | RBAM_008670 | SdpC immunity factor |
| yfjT | RBAM_008190 | unknown |
| yfkA | RBAM_008180 | degradation of c-di-AMP |
| yfkN | RBAM_008030 | degradation of c-di-AMP |
| yflN | RBAM_007820 | putative metal-dependent hydrolase |
| yflS | RBAM_007730 | malate uptake |
| yfmB | RBAM_007700 | unknown |
| yhbI | RBAM_009270 | Transcriptional regulator (MarR family) |
| yhcA | RBAM_009290 | Multidrug resistance protein |
| yhcB | RBAM_009300 | oxidoreductase associated to oxygen stress |
| yhcX | RBAM_009510 | IAA synthesis |
| yheA | RBAM_010030 | IAA synthesis |
| yhfM | RBAM_010480 | unknown |
| yhgD | RBAM_010380 | transcriptional regulator |
| yhgE | RBAM_010390 | Phage infection protein |
| yhjN | RBAM_010740 | unknown |
| yhzC | RBAM_010590 | unknown |
| yisK | RBAM_010910 | modulator of Mbl activity, similar to 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase |
| yisT | RBAM_010990 | conserved hypothetical protein |
| yjbH | RBAM_011560 | stimulation of Spx degradation |
| yjfB | RBAM_012240 | conserved hypothetical protein |
| yjiC | RBAM_012360 | bacillaene synthesis |
| ykaA | RBAM_012700 | putative Pit accessory protein |
| ykcB | RBAM_012730 | putative integral membrane protein |
| yknZ | RBAM_014110 | ABC transporter (permease) for the export of the SdpC toxin |
| ykoM | RBAM_013160 | transcription |
| ykoY | RBAM_013210 | transcription |
| ykpC | RBAM_014200 | conserved hypothetical protein |
| ykrP | RBAM_013300 | stress-responsive membrane protease |
| ykyA | RBAM_014310 | putative chromosome partitioning protein |
| ylbK | RBAM_014900 | putative hydrolase |
| ylbN | RBAM_014930 | conserved hypothetical protein |
| ylqC | RBAM_015830 | putative RNA binding protein |
| ylqD | RBAM_015840 | conserved hypothetical protein |
| ylxF | RBAM_016090 | putative kinesin-like protein |
| ymcB | RBAM_016850 | antagonist of biofilm repression by SinR, control of the phosphorelay |
| ymfH | RBAM_016710 | unknown |
| yndM | RBAM_017630 | sporulation protein |
| yneF | RBAM_017710 | unknown |
| yngA | RBAM_018300 | unknown |
| yngB | RBAM_018310 | unknown |
| yngG | RBAM_018350 | mother cell metabolism, leucine utilization |
| yngL | RBAM_018410 | unknown |
| yobS | RBAM_018860 | similar to transcription factor (AcrR family) |
| yocB | RBAM_018920 | survival of stress conditions |
| yodA | RBAM_019280 | unknown |
| yodR | RBAM_019550 | similar to butyrate-acetoacetate CoA-transferase |
| yojF | RBAM_019230 | unknown |
| ypbS | RBAM_020170 | unknown |
| ypeB | RBAM_021070 | assembly of SleB |
| ypeP | RBAM_020110 | unknown |
| ypiB | RBAM_020740 | unknown |
| ypiF | RBAM_020730 | unknown |
| ypmA | RBAM_020540 | unknown |
| ypmP | RBAM_019910 | unknown |
| yppF | RBAM_020410 | unknown |
| yqeW | RBAM_023720 | phosphate uptake |
| yqeY | RBAM_023700 | unknown |
| yqeZ | RBAM_023690 | resistance against sublancin |
| yqhL | RBAM_005440 | unknown |
| yqhO | RBAM_022830 | conserved hypothetical protein |
| yqhY | RBAM_022660 | control of fatty acid biosynthesis |
| yqiG | RBAM_022520 | similar to NADH-dependent flavin oxidoreductase |
| yqjL | RBAM_022130 | putative hydrolase, resistence against paraquat |
| yqkC | RBAM_021780 | unknown |
| yqxD | RBAM_023530 | conserved hypothetical protein |
| yqzC | RBAM_023240 | conserved hypothetical protein |
| yrdA | RBAM_024140 | unknown |
| yrkD | RBAM_00542 | unknown |
| yrkF | RBAM_005450 | conserved hypothetical protein |
| yrkO | RBAM_024100 | putative integral inner membrane protein |
| yrpD | RBAM_010640 | unknown |
| yrrC | RBAM_024590 | putative exonuclease with DNA/RNA helicase motif |
| yrrK | RBAM_024490 | 16S rRNA maturation |
| yrvO | RBAM_02462 | tRNA thiolation |
| yrzL | RBAM_024500 | unknown |
| ysdB | RBAM_025890 | conserved hypothetical protein |
| ysnE | RBAM_035380 | similar to acetyltransferase |
| ytnA | RBAM_027550 | putative amino acid permease |
| ytrE | RBAM_027350 | ABC transporter (ATP-binding protein) |
| ytxG | RBAM_026900 | unknown |
| ytzD | RBAM_026360 | conserved hypothetical protein |
| yubD | RBAM_012760 | putative efflux transporter |
| yuiA | RBAM_029140 | unknown |
| yuiB | RBAM_029130 | unknown |
| yukE | RBAM_028960 | unknown |
| yukJ | RBAM_028990 | unknown |
| yusV | RBAM_030060 | acquisition of iron |
| yuxL | RBAM_029340 | acquisition of iron |
| yvaG | RBAM_030870 | 3-Oxoacyl-acyl-carrier protein reductase |
| yvfG | RBAM_031520 | unknown |
| yvnB | RBAM_032240 | unknown |
| yvpB | RBAM_032150 | unknown |
| yvyG | RBAM_032570 | flagellar filament assembly |
| ywcE | RBAM_035390 | spore morphogenesis and germination |
| ywcI | RBAM_035310 | unknown |
| ywkB | RBAM_034200 | Putative transporter |
| ywkE | RBAM_034160 | peptide release factor methylation |
| ywlA | RBAM_034140 | putative integral inner membrane protein |
| ywnF | RBAM_033760 | putative integral inner membrane protein |
| ywqB | RBAM_033490 | putative replication initiation protein |
| ywqH | RBAM_033430 | putative replication initiation protein |
| yxaL | RBAM_036900 | membrane associated protein kinase with beta-propeller domain |
| yxkD | RBAM_036060 | Efflux transporter |
| yxxF | RBAM_036330 | Efflux transporter |
| yyaJ | RBAM_037920 | putative transporter |
| yybE | RBAM_037740 | putative transporter |
| yybF | RBAM_037730 | antibiotic resistance |
| yydA | RBAM_037150 | unknown |