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iolB

5-deoxy-glucuronate isomerase
geneiolB
locusRBAM_036770
feature typeCDS
productABS76006.1 5-deoxy-glucuronate isomerase
synonyms
homologBSU39750
start3783760
stop3784575
direction-
length816
essentialno
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1Carbon metabolism
Subcategory2Utilization of specific carbon
Subcategory3Utilization of inositol

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
iolA-iolB-iolC-iolD-iolE-iolF-
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

SigA

Protein regulator

CcpA repression IolR repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
5.3.1.30
Protein family
https://enzyme.expas
Domains
Effectors of protein activity
Refer to BSU39750
Structure
Refer to BSU39750
Malonylation
K52
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
no ortholog in B. subtilis 168

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21