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patB

pyridoxal phosphate-dependent aminotransferase
genepatB
locusRBAM_028540
feature typeCDS
productABS75185.1 pyridoxal phosphate-dependent aminotransferase
synonyms
homologBSU31440
start2972144
stop2973307
direction+
length1164
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1amino acid/ nitrogen metabolism
Subcategory2biosynthesis/ acquisition of amino acids
Subcategory3biosynthesis/ acquisition of methionine/ S-adenosy

Phenotypes of a mutant

plant-bacteria interaction

IPyA pathway of IAA biosynthesis

Expression and Regulation

Operons
Refer to BSU31440
Transcripts
Primary TSS
Secondary TSS
Internal TSS2973191
Antisense TSS2972080

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
4.4.1.8
Protein family
Domains
Effectors of protein activity
Refer to BSU31440
Structure
Refer to BSU31440
Malonylation
K355
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
no ortholog in B. subtilis 168

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Shao J, Li S, Zhang N, Cui X, Zhou X, Zhang G, Sh

Analysis and cloning of the synthetic pathway of the phytohormone indole-3-acetic acid in the plant-beneficial Bacillus amyloliquefaciens SQR9.

Microb Cell Fact. 2015 Sep 4;14:130. doi: 10.1186/s12934-015-0323-4.;PMID:26337367