| gene | ykoM |
| locus | RBAM_013160 |
| feature type | CDS |
| product | ABS73679.1 MarR family transcriptional regulator |
| synonyms | |
| homolog | BSU13340 |
| start | 1277909 |
| stop | 1278373 |
| direction | + |
| length | 465 |
| essential | no |
| protein detected in LB | not detected |
Functional category containing this gene/protein
| Category | Information processing |
| Subcategory1 | regulation of gene expression |
| Subcategory2 | transcription factors and their control |
| Subcategory3 | transcription factor/ other/ based on similarity |
Phenotypes of a mutant
plant-bacteria interaction
| transcription repressed by rice seedlings |
Expression and Regulation
| Primary TSS | |
| Secondary TSS | |
| Internal TSS | |
| Antisense TSS |
Sigma factors
Protein regulator
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
Biological materials
| "4. Lifestyles, 4. 4 Interaction with plants and growth competitors, 4.4.3 Response to plants, 4.4.3.1 transcriptomics, 4.4.3.1.2 repression by root exudate" |
References
Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.
J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684Liu L, Wang G, Song L, Lv B, Liang W
Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X
Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings
BMC Microbiology (2015) 15:21