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tcyK

amino acid ABC transporter substrate-binding protein
genetcyK
locusRBAM_030830
feature typeCDS
productABS75414.1 amino acid ABC transporter substrate-binding protein
synonymsytmK
homologBSU29370
start3199432
stop3200244
direction-
length813
essentialno
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryCellular processes
Subcategory1transporters
Subcategory2ABC transporters
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ytmI-tcyJ-tcyK-tcyL-tcyM-tcyN-
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS3199696

Sigma factors

SigA

Protein regulator

AscR activation CymR repression

Additional regulation

"Efp-dependent proteins, "

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU29370
Structure
Refer to BSU29370
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
no ortholog in B. subtilis 168

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735