sigA

RNA polymerase sigma factor RpoD

gene	sigA
locus	RBAM_023510
feature type	CDS
product	ABS74711.1 RNA polymerase sigma factor RpoD
synonyms	rpoD
homolog	BSU25200
start	2469744
stop	2470865
direction	-
length	1122
essential
protein detected in LB	not detected

Genomic Context

Functional category containing this gene/protein

Category	Information processing
Subcategory1	RNA synthesis and degradation
Subcategory2	transcription
Subcategory3	sigma factors

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings

Expression and Regulation

Operons

Transcripts

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein

Catalyzed reaction/ biological activity

E.C. number

Protein family

Domains

Effectors of protein activity

Structure

Malonylation

Acetylation

Localization

Biological materials

Mutant

LacZ fusion

GFP fusion

FLAG-tag construct

Antibody

Additional information

References

Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings