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hpf

ribosome-associated translation inhibitor RaiA
genehpf
locusRBAM_032460
feature typeCDS
productABS75576.1 ribosome-associated translation inhibitor RaiA
synonymsyvyD
homologBSU35310
start3366530
stop3367096
direction-
length567
essential
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryLifestyles
Subcategory1coping with stress
Subcategory2general stress proteins (controlled by SigB)
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU35310
Transcripts
Primary TSS3367119
Secondary TSS3367127
Internal TSS
Antisense TSS

Sigma factors

SigB SigH

Protein regulator

PhoP activation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigB Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU35310
Structure
Refer to BSU35310
Malonylation
"K17,83"
Acetylation
K180
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735